Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDI--GTYTDESVDFPSYAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSNILCLGERVIGEGLALLLVDTWLEASFAG-DRHKRRLDKITELERK
3K7S Chain:D ((24-169))
-RVAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLACGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSGEERHVRRIEKIRAIE--
General information:
TITO was launched using:
RESULT:
Template:
3K7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93978 for 1209 contacts (-77.7/contact) +
2D Compatibility (PS) -15615 + (NN) -8638 + (LL) 372
1D Compatibility (HY) -12000 + (ID) 3050
Total energy: -132909.0 ( -109.93 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_3K7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K7S-query.scw
PDB file :
Tito_Scwrl_3K7S.pdb
: