Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPGTTFKETNGD--------VAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGE-VNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNV-----FISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTSGKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVPGLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDH----KIHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNG-YQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK |
4IPN Chain:E ((20-485)) | --------FPDDFLWGGAVAANQVEGAYNEDGKGLSVQD---VLPKGGLGEATENPTEDNLKLIGIDFYHKYKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVTLSHYETPLYLARKYHGWVDRRMIHFYEKFARTVLERYKDKVKYWLTFNEVNSVLELPFTSGGIDI---PKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNPKDVWATHEYENLN-YLFSDVHVRGYYPNYAKRYFKENDINIEFAAEDAELLKNYTVDFLSFSYYMSVTQS-ALPTQYNS------G-----------GLV----NPYLESSEWGWQIDPIGLRIILNRYYDRYQIPLFIVENGLGAKDQLIKDELNNLTVQDDYRIQYMKEHLLQVAEALQDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGSGTLNRYKKMSFTWYKEVIESNGESL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130429 for 3819 contacts (-34.2/contact) +
2D Compatibility (PS) -46923 + (NN) -17843 + (LL) 2076
1D Compatibility (HY) -41200 + (ID) 9550
Total energy: -243869.0 ( -63.86 by residue)
QMean score : 0.483
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