Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAI-KESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAFGSDMFDPVKLIITLAATDS--ESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
1A6J Chain:A ((10-156))
-LSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKMGSTGI--GNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDT-
General information:
TITO was launched using:
RESULT:
Template:
1A6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99722 for 1154 contacts (-86.4/contact) +
2D Compatibility (PS) -15594 + (NN) -6433 + (LL) 432
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -128817.0 ( -111.63 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1A6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6J-query.scw
PDB file :
Tito_Scwrl_1A6J.pdb
: