Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLFKTIGIIGGGQLGQMMAIAAIYMGHKVITLDPASDCSASRVSEVIVAPYDDVEALGQLAARCDVLTYEFENVDADGLDAVVSAGQLP--QGTDLLRISQNRIFEKDFLANKAGVTVAPYKVVTSSLDLE-GFD-LTKTYVLKTATGGYDGHGQKVIRSAEDLPEAQQLANSAECVLEEFVDFDLEISVI-VSGNGQDVTVFPVQENIHRNNILSKTIVPAR-ISDQLADKAKKMAVQIAKELQLSGTLCVEMFVTADDIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGQPLPPIKLHAPAVMLNVLGQHVQQAIDYVAENPSAHLHIYGKLEAKHNRKMGHVTVFTEDADEVEEF |
3AW8 Chain:B ((12-351)) | ----------------RMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFAEGLALVTYEFENVPVEA--ARRLEGRLPLYPPAKALEVAQDRLREKTFFQG-LGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRRG------QALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVGEELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLGSTAPRGQSAMVNLIGE--KPPFAEVLKVEGAHLHWYGK-AVRPGRKVGHITLRRDGLKALEEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154604 for 2661 contacts (-58.1/contact) +
2D Compatibility (PS) -36313 + (NN) -18575 + (LL) 720
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -237422.0 ( -89.22 by residue)
QMean score : 0.451
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