Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------MIKIIVHAFINSGKIGVVEVLFATSDDKLLMTKMSEFQRHYPGDYLAIYDLPLDTDLNKLSHYPSVAISKEDFHEEKANETNENS------------------------------------------------- |
2ABO Chain:A ((6-136)) | SGTYWATLITAFLKTVSKVEELDCVDSA-VLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDL---------SKLFTSLFVDVINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ABO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1572 for 381 contacts (4.1/contact) +
2D Compatibility (PS) -8035 + (NN) -5112 + (LL) 584
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -14591.0 ( -38.30 by residue)
QMean score : 0.185
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