Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MKMTVYF--DGNFWLGLIEYDDDGDYKVFRYFFGKEPKD--DDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH-
4CRI Chain:A ((27-145))
SFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSE-DEYFSAGVVKGHRKESGELYYSIEKEGQRKWYKRMA------VILS----------------------LEQGNRLREQYGLG
General information:
TITO was launched using:
RESULT:
Template:
4CRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8917 for 770 contacts (11.6/contact) +
2D Compatibility (PS) -11893 + (NN) -1466 + (LL) 2704
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -6738.0 ( -8.75 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_4CRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CRI-query.scw
PDB file :
Tito_Scwrl_4CRI.pdb
: