Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEK-LISGERFAGKKQFIRDIQPFFNAFKAD
2Q1Z Chain:A ((27-162))
-AAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHLFDPS---RASVATWIFTIARNRRIDGLRKDRQPEPEDL--FWGPD-----SEP-DQADVYEMQQENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLPLGTIKSRIRL
General information:
TITO was launched using:
RESULT:
Template:
2Q1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25073 for 790 contacts (-31.7/contact) +
2D Compatibility (PS) -13735 + (NN) -447 + (LL) 756
1D Compatibility (HY) 5600 + (ID) 750
Total energy: -33649.0 ( -42.59 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1Z-query.scw
PDB file :
Tito_Scwrl_2Q1Z.pdb
: