Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNMMKYISELTTLIALAGLMVIITLINPNFLTTNNLLNLLLQVTANGFIAFGMTFVILTGGIDLSVGSILALSSALTAGLIGHGVPVGIAIVLSVALGGILGMLNGLFISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMFLTFIILYILLHKTAFGKSVYALGGNEKAAYISGIKLNKVKIIIYTISGIMASISGLIITSRLSSAQPTAGASYEMDAIAAVVLGGTSLSGGKGRIIGTLIGALIIGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK |
| 1FQY Chain:A ((8-233)) | KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHIS--------------------GAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN--------------------------------------------------DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR----RDLGGSAPLAIGLSVALGHLLAIDYTGCGIN-----------PARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171983 for 1864 contacts (-92.3/contact) +
2D Compatibility (PS) -23185 + (NN) 940 + (LL) 6692
1D Compatibility (HY) 400 + (ID) 1600
Total energy: -188736.0 ( -101.25 by residue)
QMean score : 0.198
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