Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQHQVAEEMSTYGYIIVKTLITKVEPDAEVKQ-SMNEINAAQRKRVAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQ-RKAIVDGLADSIQELKDANVTLTEEQIMSILLT-NQYLDTLNTFAINGNQTIFLPNN-PE-GVEDIRTQVLSALKTR |
| 4NQI Chain:A ((14-243)) | -------------------------NPVIEITLKTINNLKVNSPPLFTEVIKAANKYQQQAQALSQAGLVLADTLTRLTIH-----------NGGDFGEGFKKLADAIKDLENR-----RDDVAKVLLNEFITPNKQAIEDDQKAIATFEKNYKKDRD--------------QMRQDILKLEAKTRKAGKITELNDKIKESEQLNANKLRDVVL-------MERRKHATFLSQFNQFLEKEIELSAD-------TMSKFSTNLNTHRDLINSQSQLPLEMESMISKQER---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30236 for 1298 contacts (23.3/contact) +
2D Compatibility (PS) -22613 + (NN) -5053 + (LL) 9352
1D Compatibility (HY) 2800 + (ID) 1800
Total energy: 12922.0 ( 9.96 by residue)
QMean score : 0.230
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