Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLSGWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPGIGQQFVTSIPTKDYPVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
| 2JO8 Chain:A ((1-51)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQK--YQSKRQPILDAIEAK-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4681 for 204 contacts (22.9/contact) +
2D Compatibility (PS) -5221 + (NN) 531 + (LL) 20324
1D Compatibility (HY) -2400 + (ID) 650
Total energy: 17265.0 ( 84.63 by residue)
QMean score : -0.028
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