Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKNRTFKLVGAGSSSTQEKIEKPALSFMQDAWRRLKKNKLAVVSLYLLALLLTFSLASNLFVTQKDANGFDSKKVTTYRNLPPKLSSNLPFWNGSIKYAGNTESTDAYKSQNVPEKVKYALGTDSLGRSVAKRIIVGIRISLLVAIAATFIDL-----IIGVTYGLVSGFAGGRLDTLMQRIVEVISSIPNLVIVTMLGL---VLGNGITAIIISIAFTGWTSMSRQV-------RNLTLSYREREFVLAARSL----GESPIKIAFKHILPNISGIIIVQIMMTIPSAIMYEAVLSAINLGVKPPTASLGSLISDAQENLQYYPYQVILPALALVMISLAFILLGDGLRDAFDPKSSDE |
| 2QUO Chain:A ((4-126)) | -----------------------------------------------------------------------------------------------------------------------------------------------------KEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKF------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73281 for 663 contacts (-110.5/contact) +
2D Compatibility (PS) -10829 + (NN) 4216 + (LL) 16944
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -66800.0 ( -100.75 by residue)
QMean score : 0.156
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