Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKGNKKLNSSKLGDYTPLEFGSIFLRIVKLLSDFIYVIILLFVMLGVGLAVGYLASQVDSVKVPSKNSLVTQVNTLTRVSRLTYSDKSQISEIDTDLQRTPVAKDAISDNIKKAIIATEDENFNDHKGVVPKAVLRAAAGSVLGFGESSGGSTLTQQLLKQQILGDDPSFKRKSKEIIYALALERYMDKDSILSDYLNVSPFGRNNKGQNIAGIEEAAQGIFGVS-------------AKDLTIPQAAFLAGLPQSPIVYSPYTADAQLKSDKDLSFGIKRQKNVLYNMY-RTRALTKDEYKSYKDYDIKKDFIKPAVATTNHHDYLYYSALSE-AQKVMYNYLIKKDNVSEHDLKND-ETRATYRHRAIEEIQQGGYTIKTTINKSVYQAMQDAAAQYGGLLDDG---TGKVQMGNVLTDNSSGAIIGFIGGRNYSE------NQNNHAFDTARSPGSSIKPILPYGIAIDQGMLGSGSVLSNYPTTYSSGEKIMHADEEGT--AMVNLQESLDISWNIPAFWTYKMLR-----------D-------RGVDVKNYMEKLDYPIE-------N--------F---GIESLPLGGGIDTSVAQQTNLYQMIANGGVYHKQYMIESIEDSNGK-----VIYNHESK--PVRVFSKATATILQQLLHGPINS---GKTTTFKNRLQGLNSGLAGVDWIGKTGTTNSTSDVWLMLST----PKVTLGGWAGHDNNASLAKLTGYNNNANYMAHLVNAINNADGNTFGKSERFRLDDSVIKAKVLKSTGLQPGVVTVNGRRITVGGESTTSYWAKNGPGTMTYRFAIGGTDSDYQKAWSTLGGKR |
| 2WAD Chain:A ((57-678)) | ----------------------------------------------------------------------------SSARGEIYDASGKPLVENT-LKQVVSFTRSNKM------------------TATDLKEIAKKLLTYVS-----ISSPNLTERQLADYYLADP-EIYKKTVEALP---------ESELYNNAVDSVPTSQ-----LNYTEDEKKEIYLFSQLNAVGNFATGTIATDPLNDSQVAVIASISKEMPGISISTSWDRKI----LE---TSLSSIVGSVSSEKAGLPAEEAESYLKKGYS----L------------NDRVGTSYLEKQYEEVLQGKRPVKEIHLDKHGDMESV----ENIEEGSKGKNIKLTIDLAFQDSVDALLKSYFNSELGNGGAKYSEGVYAVALNPQTGAVLSMSGLK-HDLKTGELTPDSLGTVTNVFVPGSVVKAAT-ISSGWENGVLSGNQTLTDQPIVFQGSAPIYSWYKLAYGSFPITAVEALEYSSNAYVVQTA-LGIMGQTYQPNMFVGTSNLESAM-GKLRSTFGEYGLGSATGIDLPDESTGLVPKEYNFANFITNAFGQFDNYTPMQLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELIQAIDTKEINKVNISESDMAILHQGFYQVSHGTSPLTTGRAF--S-----DGATVSISGKTGT-----NTNAVAYAPTENPQIAVAVVFPHNTN------LTKNVGPAIARDIINLYNQHHPMN------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73933 for 4240 contacts (-17.4/contact) +
2D Compatibility (PS) -54905 + (NN) -11218 + (LL) 12056
1D Compatibility (HY) -3200 + (ID) 4350
Total energy: -135550.0 ( -31.97 by residue)
QMean score : 0.300
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