Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
1CUK Chain:A ((167-185))
---------LVALGYKPQEASRMVSKIARPDASSETLIREALRAAL----------------------
General information:
TITO was launched using:
RESULT:
Template:
1CUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2980 for 87 contacts (-34.3/contact) +
2D Compatibility (PS) -1902 + (NN) 1369 + (LL) 2356
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -3807.0 ( -43.76 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1CUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CUK-query.scw
PDB file :
Tito_Scwrl_1CUK.pdb
: