Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSREYITLSKNIIKHLGGQNNINNVYHCQTRLRFSLNDPTKVNLEQLK-TLKEVKTVVISGGQHQIVIGTHVAKVFEEINSLIETNSTTKTEQTKKAKAVSRIIDFVSGTFQP--ILPALSGAGMIKALLALLLVFKILTPLSQTYILLNLFADGVFYFLPILIAITAAQKLKANPILALGTVVMLLHPNWANLVASGKPVSLFHTIPFTLTNYASSVIPIILIICVQAYIEKYLNQIIPKSLRLVLVPMLIFLSMGILSFSILGPMGTIAGQYLAVIFTFLSKYASWAPAFLV--GAFA-PILIMFGVHSGIAA-LGITQLTKLGFD--SIFGPGMLCSNIAQATAGT--------VVTLITKEKKLKEIAGPAAITA----YMGITEPILYG-VNLPKRYPLIASLIGGGLGGLYAGIMNAHRFAVGSSGL-PGLFLYISHTSTHLFITMLIAVIITVSTTAILTFIL-AQYYEKQVSIRQRD-- |
| 4UQU Chain:A ((1-462)) | AEKEKNAAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPWFLSAYDEKVRQIENGENGPK--------MKAKNVGEARAGRALEAAGWTLDINYGNIYPNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTD-----------------PVELTNYVKFAARMAGADLVGVARLNRNWV----YSEAVTIPADVPYEQSLHKEIEKPIVFK-DVPLPIETDDELIIPNTCENVIVAGIAMNREMMQTAP-----NSMACATTAFCYSRMCMFDMWLCQFIRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRMGACITPEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSIHNQSGKLQWQNDYNKCLGYWPES-GGYCGVCVAVCPFTKGNIWIHDGVEWLIDNTRN----------ITEVWDGKINTYGLDADHFRDTVSFRKDRVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227775 for 3457 contacts (-65.9/contact) +
2D Compatibility (PS) -41964 + (NN) 9428 + (LL) 4984
1D Compatibility (HY) -8000 + (ID) 4000
Total energy: -267327.0 ( -77.33 by residue)
QMean score : 0.141
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