Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLISEEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRINGLIDCSPFGCRTGFHMIMWGKQDATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
1J6X Chain:A ((2-149))
---KMNVESFNLDHTKVKAPYVRIADRKKGVNGDLIVKYDVRFKQPNRDHMDMPSLHSLEHLVAEIIRNHANYVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVL---KAKEVPASNEKQCGWAANHTLEGAQNLARAFLDKRAEWSEVG----
General information:
TITO was launched using:
RESULT:
Template:
1J6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76880 for 1068 contacts (-72.0/contact) +
2D Compatibility (PS) -15859 + (NN) -8502 + (LL) 552
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -114289.0 ( -107.01 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1J6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J6X-query.scw
PDB file :
Tito_Scwrl_1J6X.pdb
: