Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKEGQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE
1P94 Chain:A ((1-76))
MSLEKAHTSVKKMTFGE---NRDLERVVTAP----------VSSGKIKRVNVNFDEEKHTRFKAACARK-----GTSITDVVNQLVDNWLKENE----
General information:
TITO was launched using:
RESULT:
Template:
1P94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24272 for 323 contacts (75.1/contact) +
2D Compatibility (PS) -7887 + (NN) -3542 + (LL) 1456
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: 12099.0 ( 37.46 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1P94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P94-query.scw
PDB file :
Tito_Scwrl_1P94.pdb
: