Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDFLLLKSLHSLLGLTITVCDQNFSVIREYKSEKTISLFYNHYLILSNFSKTQHDFLFHYGSLGELFLVHHIQQYYIIIGPWRSNVIDPLLLKKKLTETQINASEQNYFIDRLSQLPFFSLSQIRELLIVTNYCLTGVVKDKLSEPLHYYTKGWSNSFDLDKIKQFSKQNMSSYKYQYHFENNILKAVKSGSEFLLKETVEQFSNSIVPIISGDELRSEKNYSIMIYDRLSQATIQAGLDIETAYRARDRFIKENESTISLNEVLKLRDTAILFYTQQVHSLKKHLETPHSQTIVAVIRYLENNLNR-FIKTEEIAKECHMSESKLRKLFKQEKHITIQQYFLNLKIEAAKQLLD-ENKKVEEVSNLLGFSTSSNFSRTFKKIVGISPLEYKQKPKTI |
2K9S Chain:A ((3-106)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28351 for 677 contacts (-41.9/contact) +
2D Compatibility (PS) -10972 + (NN) -5291 + (LL) 22524
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -29890.0 ( -44.15 by residue)
QMean score : 0.706
|
|
|