Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKWLEKSIVQS-DVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPK-GTILVAKSSHTRI-FQDLDEKEIIVGGPYQATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKE--AYVVLPTTISDEIPKEMARLSK |
| 3RQ8 Chain:A ((11-278)) | ----EEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVL---TADCPVILDAGA---LAKRTYPKREGP-VILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED--PKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147619 for 2380 contacts (-62.0/contact) +
2D Compatibility (PS) -28138 + (NN) -4637 + (LL) 1216
1D Compatibility (HY) -9600 + (ID) 4350
Total energy: -193128.0 ( -81.15 by residue)
QMean score : 0.521
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