Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISVDELKK-LTTVEAADAKVGTILEEGVSLPQKTNAQGLVVD--A-LDSKSNVRYLYVEDLKNSPSNITKAYAVPFVLELPVANST-GTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTIGEEFKWFLKSTIPANLG----DYEKFEITDKFADGLTYKS-VGKIKIGS---KTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKADNP----K----PSNPPRKPEVHTGGKRFVKKDST---ETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANA-----EGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 3UXF Chain:A ((36-472)) | ----------------------------------------TIDPDAATTLTVHKCEQT--------------GTGNEDP-----QAECKPVSDVEFTITKLNVDLTTYDGWKTLADLKGDVVKAGALKS-TTVQKITTGANGLASFTDAQTE---VGAYLVSET--RTPDK-V-IPAEDFVVTLPMTNPQDTAKWNYNVHVYPKNTL---SGVDKQVTD----KPAPGSGRDITYTITTSIPKVDYPGGARIKRYEVVDRLDKRIKKEALTPVVKIVGQNEVTLAETTDYTLITAEGKDHNWATIQLTEEGRRKASEAR--------------YNGNGETK--LQVTLNAKFDAAVNLEGDLSNTAGLIPNDSPNFTWDPNNPGTTTDIPGIPTTPVLSKYGKVILTKTGTDDLADKTKYNGAQFQVYECTKTAS-GAT--LRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCLVETKAPEGYNLQADPLPFRVLAEKAEKKAATEVTVTDIPK--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20510 for 3081 contacts (6.7/contact) +
2D Compatibility (PS) -42629 + (NN) -5040 + (LL) 8556
1D Compatibility (HY) -8000 + (ID) 4350
Total energy: -30953.0 ( -10.05 by residue)
QMean score : 0.301
|
|
|