Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQETHQLTIVHLEARDIDRPNPQLEIAPKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFLVDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQD--IDAAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIGQA--ETAVTIEKSKTV-------------------TVTIENKKVPTPKVPSRGGLIPKTGEQQAMALVIIGGILIALALRLLSKHRKHQNKD |
2WW8 Chain:A ((734-860)) | -------------------------------------------------------------------------------------------------------------------------------------------------------KLGDIEFIKVNKND--KKPLRGAVFSLQKQHPDYPD-----IYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGYKPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKHYITNEP------IPPK--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1174 for 688 contacts (1.7/contact) +
2D Compatibility (PS) -11159 + (NN) -709 + (LL) 15300
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 106.0 ( 0.15 by residue)
QMean score : 0.452
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