Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLS--RNPLLIDPFTSKQKEGLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
3RBK Chain:B ((16-214)) | ---------------------------------------------NINAFKEAVTKIDRVEINRRLELAYAYNASIAGA-YPALKDPYS------VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHR-------FTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91611 for 1435 contacts (-63.8/contact) +
2D Compatibility (PS) -18948 + (NN) -4500 + (LL) 10516
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -130043.0 ( -90.62 by residue)
QMean score : 0.565
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