Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKVFNVREEEATLAQDWAN-RNHVELSMSEGPLTLETVNEVEGFDGIANAQIGPLDDAIYPLLKEMGIKQIAQRSAGVDMYNLELAKQHGIIISNVPSYSPESIAEFTVTIALNLIRKVELIRANVREQNFSWTLPIRGRVLGNMTVAIIGTGRIGLATAKIFKGFGCRVIGYDIYHNPMADGILEYVNSVEEAVEKADLVSLHMPPTAENTHLFNLDMFKQFKKGAILMNMARGALVETKDLLEALDQGLLEGAGIDTYEFEGPYIPKNCQGQDISDKDFLRLINHPKVIYTPHAAYYTDEAVKNLVEGALNACVEVVETGTTTTRVN
1J4A Chain:D ((3-330))-KIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWA-PTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEAETPVK


General information:
TITO was launched using:
RESULT:

Template: 1J4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203389 for 2638 contacts (-77.1/contact) +
2D Compatibility (PS) -35243 + (NN) -17483 + (LL) 384
1D Compatibility (HY) -22400 + (ID) 5400
Total energy: -283531.0 ( -107.48 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_1J4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J4A-query.scw
PDB file : Tito_Scwrl_1J4A.pdb: