Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAE------------DKAKSVLKDVKADGADFAKIAKEKTTATD--KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 2PV1 Chain:A ((2-102)) | ---------------------------------------------------------------------------------------------------------------------------------------------------ELNLSHILIPLPENPTSDQVNEAESQARAIVDQAR-NGADFGKLAIAHSADQQALNGGQMGWGRI--QELPGIFAQALSTAKKGDIVGPIRSGV------GFHILKVNDLR------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18160 for 617 contacts (-29.4/contact) +
2D Compatibility (PS) -9390 + (NN) -5560 + (LL) 14592
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -21768.0 ( -35.28 by residue)
QMean score : 0.624
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