Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MLYKKRRF----FMSKNNNTTCLI---------ETAIFAALAMALSMIPDFASWFTPSF------GAIPLILFALRRG-TKYGLFAGLIWGLLHFVLSKVYYLSLSQVFIEYILAFISMGLAGVFSAKFKDALSSSSKTKALSL--ALSGAILATFVRYVWHYIAGVIFWAS-YAP-----KGMSATLYSLSVNGTAGLLTLFFVVISIIILVISYPSFFLPKK |
| 2PNN Chain:A ((11-258)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222879 for 1442 contacts (-154.6/contact) +
2D Compatibility (PS) -19925 + (NN) -350 + (LL) 64
1D Compatibility (HY) 800 + (ID) 1750
Total energy: -244040.0 ( -169.24 by residue)
QMean score : 0.301
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