Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINIDEKPE--KI----EYVKNLGFSAAPVIEAGNVVFSGFQPSKLKELV
3IC4 Chain:A ((11-90))
MAEVLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELI
General information:
TITO was launched using:
RESULT:
Template:
3IC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41870 for 493 contacts (-84.9/contact) +
2D Compatibility (PS) -7888 + (NN) -4739 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -60147.0 ( -122.00 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_3IC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IC4-query.scw
PDB file :
Tito_Scwrl_3IC4.pdb
: