Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MLYYFIYLIKVIGNGLK-------LSLICGLNW----LIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRM--KTPLFLG-----VMYVFFLAGNSYIKAHLLTEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLKKVIDKE---YLGIRKFTDSLPPEINLYKDADEEDADKRMRLINQNVIKHPYQEVVELSFLNREVITAIGYKAVPFEKETERTF-------------------------IDDDTIYYPIFTVHPFRNLEGK--------------------------SDFYHILMKLKLSRKAAFTKNGERLLIRDF--------------------------- |
| 4NZR Chain:M ((26-416)) | NDGSYQSEIDLSGGANFREKFRNFANELSEAITNSPKGLDRPVPKTEISGLIKTGDNFITPSFKAGYYDHVASDGSLLSYYQST--EYFNNRVLMPILQTT---NGTLMANNRGYDDVFRQVPSFSGWSNTKATTVSTSNNLTYDKWTYFAAKG-SPLYDSYPNHFFEDVKTLAIDAKDISA--LKTTIDSEKPTYLIIRGLSGNGSQLNELQLPESVKKVSLYGDYTGVNVAKQIFANVVELEFYSTSKANSFGFNPLVLGSKTNVIYDLFASKPFTHIDLTQVTLQNSDNSAIDANKLKQAVGDIYNYRRFERQFQGYFAGGYIDKYLVKNVNTNKDSDDDLVYRSLKELNLHLEEAYREGDNTYYRVNENYYPGASIYENERASRDSEFQNEILKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100248 for 1925 contacts (-52.1/contact) +
2D Compatibility (PS) -27434 + (NN) 5672 + (LL) 1188
1D Compatibility (HY) -3600 + (ID) 3100
Total energy: -127522.0 ( -66.25 by residue)
QMean score : 0.129
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