Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKCPIIALDFSDLASVTTFLEHFPKEELLFVKIGMELYYSEGPSIIRYIKSLGHRIFLDLKLHDIPNTVRSSMSVLAKLGIDMTNVHAAGGVEMMKAAREGL----GEGPILLAVTQLTSTSQEQMQVDQHINLSVVDSVCHYAQKAQEAGLDGVVASAQEVKQIKKQTNEHFICLTPGIRPPQTNQLDDQKRTMTPEQARIVGADYIVVGRPITKAENPYQAYLEIKEEWNRIK
3UWQ Chain:B ((31-251))
------IVALDYDNLADALAFVDKI-DPSTCRLKVGKEMFTLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQ-GIGILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIRPAGS-----QRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL----
General information:
TITO was launched using:
RESULT:
Template:
3UWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138956 for 1722 contacts (-80.7/contact) +
2D Compatibility (PS) -22923 + (NN) -8299 + (LL) 868
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -189160.0 ( -109.85 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3UWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWQ-query.scw
PDB file :
Tito_Scwrl_3UWQ.pdb
: