Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTIN--DHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
3IL2 Chain:B ((4-199))
------VPEAAISRLITYLRILEELEAQGVHRTSSEQLGELAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGDLGSALADYPGFGES-FELRGFFDVDPEK-VGRPVRGGV----IEHVDLLPQRVPGRIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAILNPK
General information:
TITO was launched using:
RESULT:
Template:
3IL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143539 for 1410 contacts (-101.8/contact) +
2D Compatibility (PS) -21189 + (NN) -7740 + (LL) 792
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -194476.0 ( -137.93 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3IL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IL2-query.scw
PDB file :
Tito_Scwrl_3IL2.pdb
: