Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANF---FGITKDNQFITP-LSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDK------FTEAGACGTAAVISPIGGIQNGD-DFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
3DTG Chain:B ((46-372)) | ---------------------IDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA-GFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111014 for 2515 contacts (-44.1/contact) +
2D Compatibility (PS) -33722 + (NN) -12928 + (LL) 1724
1D Compatibility (HY) -25200 + (ID) 6800
Total energy: -187940.0 ( -74.73 by residue)
QMean score : 0.456
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