Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
4Q5C Chain:B ((385-427)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LENGKVYTSHSQRTPRDMMGQACLNCHAEWTEDQALYAIDYIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5369 for 196 contacts (27.4/contact) +
2D Compatibility (PS) -4317 + (NN) 505 + (LL) 12684
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 10741.0 ( 54.80 by residue)
QMean score : 0.399
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