Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVH---LEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
3RBK Chain:B ((20-214)) | --------------------------------------------------FKEAVTKIDRVEINRRLELAYAYNASIAGA-YPALKDPYS-------VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHR-------FTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVE---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71795 for 1381 contacts (-52.0/contact) +
2D Compatibility (PS) -18571 + (NN) -5385 + (LL) 9548
1D Compatibility (HY) -21200 + (ID) 5300
Total energy: -112703.0 ( -81.61 by residue)
QMean score : 0.499
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