Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVFSVKTFNNINQIGLQELGN-RFQIDG----D---------MSENPDAYIIRSQ-NLHNQDF--PSNLKAIARAGAGTNNIPIEEASAQGIVVFNTPGANANAVKEAVIAALLLSARDYLGANRWVNTLTGTDIPKQIEAGKKAFAGNEIAGKKLGVIGLGAIGARIANDARRLGMTVLGYDPYVSIETAWNISSHVQRVKEIKDIFETCDYITIHVPLTNETKHTFDAEAFSIMKKGTTIINFARAELVNNQELFKAIETGVVKRYITDFGD-----------KELLNQKGITVFPHVGGSTDEAELNCAIMASQTIRCFMETGEITNSVNFPNVHQIQT-APFRITLINKNVPNIVAKISTAVSELGINIDNIINRSKGDYAYTLIDLDET--DNNKISTLIEEFEGDENIVRVRLIAKQQ |
3K5P Chain:A ((15-416)) | -RINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAI-SSAHIIGIRSRTQLTEEIFAAANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAG---------GWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY-----GNVKPAASLDELLKTSDVVSLHVP-----SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEADGVGEAS---DAVLQEIREIPGTIRARLLY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185515 for 3071 contacts (-60.4/contact) +
2D Compatibility (PS) -40195 + (NN) -16057 + (LL) 1680
1D Compatibility (HY) -20000 + (ID) 4750
Total energy: -264837.0 ( -86.24 by residue)
QMean score : 0.506
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