Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYKDYTGLDRTELLSKVRHMMSDKRFNHVLGVERAAIELAERYGY----DKEKAGLAALLHDYAKELSDDEFLRLIDK--------YQLDP-DLKKWGNNIWHGLVGIYKIQEDLAIKDQDILAAIAKHTVGSA--QMSTLDKIVYVADYIEHNRDFPGVEEARELAKVDLNKAVAYETARTVSFLASKAQPIYPKTIETYNAYIPYLD |
| 3MEM Chain:A ((277-406)) | -----------------------VDYWQQAIWQAQSAGILASMMPRGQRPLFGLAYLAGLLHNFGHLVLAQVFPPHFKLVCRSLEVSPHIDSSVIEHYLLGITREQIAAQLMEN-WGMP-DEVTLAIRYQKNPAYDGPHNVYARLLWLGRQLLTERGVALGAGESATQAVYDELGLDRELVQEQFDELVRRKDSIMAMAGMMSQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27560 for 874 contacts (-31.5/contact) +
2D Compatibility (PS) -12417 + (NN) -4947 + (LL) 1664
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -48760.0 ( -55.79 by residue)
QMean score : 0.447
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