Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRTD-AQVDATKENLEKEGIPVQGKDHLLFLKKGMKSKESRRQAVQ-KDTNLIMLFGDNLVDFA-DFSKSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKHLDV-QKQLKERQKMLHSYD |
| 3PCT Chain:A ((11-251)) | --------------------------------------------------NQAKLQQQVAMGLIWTQQSGEYAALAHQAFNSAKMAFDHA------KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-SNKSVRFKQVEDMGYDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYGDWEGGLDKNYFKGDSQSKLDVRAKAIHAWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21461 for 1761 contacts (-12.2/contact) +
2D Compatibility (PS) -25518 + (NN) -16312 + (LL) 4348
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -76443.0 ( -43.41 by residue)
QMean score : 0.474
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