Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAV-DAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFPDG--KEVSVLLALAATSS--AIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
1A6J Chain:A ((8-157))
-LQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTRE-KMGST-GIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLH-TLSLVAKRLADKTICRRLRAAQSDEELYQIITDTE------------
General information:
TITO was launched using:
RESULT:
Template:
1A6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91244 for 1167 contacts (-78.2/contact) +
2D Compatibility (PS) -15092 + (NN) -196 + (LL) 900
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -112832.0 ( -96.69 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1A6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6J-query.scw
PDB file :
Tito_Scwrl_1A6J.pdb
: