Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHRQAVHSD-----------------------AIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVM--NECDIKNIVFSSTAATYGIPEQ---VPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALRYFNVAGDKPDGSIGEDHKPETHLLPIIL-----QVAQGVRDKIM-IFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESN------VFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED
1GY8 Chain:D ((3-382))MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCD--KIIFSSSAAIFGNP--TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA----DKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA-


General information:
TITO was launched using:
RESULT:

Template: 1GY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172993 for 2818 contacts (-61.4/contact) +
2D Compatibility (PS) -35226 + (NN) -19692 + (LL) 836
1D Compatibility (HY) -31600 + (ID) 8050
Total energy: -266725.0 ( -94.65 by residue)
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_1GY8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GY8-query.scw
PDB file : Tito_Scwrl_1GY8.pdb: