Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTI-IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPE-DRSYNVVIPGKSLTELSKILDDNQELVDIVITE-------TQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAEIRVSFTGAMRPFLIRTPN---------------DETIVQLILPVRTY
5AGV Chain:A ((17-405))LTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGA--------EIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGN--RVALTCGNARFSLPTMPVEDYPTLPTLPE-ETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGG-SDVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADR-GA-QVRMEFA-DGSVRLSAGADDVGRAEEDLVV-DYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPLNGNGPFPAVSTDYVYLLMPVRLP


General information:
TITO was launched using:
RESULT:

Template: 5AGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233665 for 2956 contacts (-79.0/contact) +
2D Compatibility (PS) -38921 + (NN) -9254 + (LL) 488
1D Compatibility (HY) -25600 + (ID) 5000
Total energy: -311952.0 ( -105.53 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_5AGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AGV-query.scw
PDB file : Tito_Scwrl_5AGV.pdb: