Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYT--PDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNF-SMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
3IT9 Chain:D ((11-351)) | -------------------------------------VDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTF--------QTVHGLDAPG------QFSTARDMALLGKALIHDVPE-----EYAIHKEKEFTFNKIRQPNRNRLLWS-----SNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI--RFNESEKLLTWGFRFFETVTPIKPDATFV----TQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI---------DFQLNGKSIEQRPLIVMENVEEG----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83265 for 2915 contacts (-28.6/contact) +
2D Compatibility (PS) -36347 + (NN) -11522 + (LL) 7308
1D Compatibility (HY) -23200 + (ID) 6200
Total energy: -153226.0 ( -52.56 by residue)
QMean score : 0.514
|
|
|