Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMPGLF
2M2K Chain:A ((65-101))
-----------------------------------------QVRFTLDRQGHVLAVTLVSSA----GLPSLDREIQALVKRA-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2M2K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9266 for 167 contacts (-55.5/contact) +
2D Compatibility (PS) -4030 + (NN) -2110 + (LL) 4492
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -12464.0 ( -74.63 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_2M2K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M2K-query.scw
PDB file :
Tito_Scwrl_2M2K.pdb
: