Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDD-EKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNLK
2W1T Chain:A ((3-51))
----ATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGDVILKKYSP--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2W1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14256 for 207 contacts (-68.9/contact) +
2D Compatibility (PS) -5216 + (NN) -669 + (LL) 3540
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -25001.0 ( -120.78 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2W1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W1T-query.scw
PDB file :
Tito_Scwrl_2W1T.pdb
: