Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-SGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK
2B33 Chain:B ((14-136))
-KRFVETDKAPKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRPARSFVAVAQLPRNVEIEIEAIAV--
General information:
TITO was launched using:
RESULT:
Template:
2B33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68227 for 930 contacts (-73.4/contact) +
2D Compatibility (PS) -13148 + (NN) -3487 + (LL) 464
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -102098.0 ( -109.78 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_2B33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B33-query.scw
PDB file :
Tito_Scwrl_2B33.pdb
: