Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAA-RREDVVYAVPGHPFVAEKTVQLLTERQEK----ENVQVKVAGGQSFLDATFNVLQIDPIEG--FQFVDAGTLS----ADELEL----RHHLIICQVYDQ---MTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
3NUT Chain:A ((8-236)) | -SGWVTVAGLGPGREDLVTPEVTAALAEATDIVGYIPYV---ARIAPRE--GLTLHP----TDNRV--ELDRATHALEMAAEGRRVVVVSSGDPGVFA-MASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAINLSDNLKPFEILEKRLRHAARGDFAMAFYNPRSKSRPHQFTRVLEILREECEPGRLILFARAVTTPEQAISVVELRDATPE-MADMRTVVLVGNAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112089 for 1638 contacts (-68.4/contact) +
2D Compatibility (PS) -23036 + (NN) -12485 + (LL) 21668
1D Compatibility (HY) 1600 + (ID) 1750
Total energy: -126092.0 ( -76.98 by residue)
QMean score : 0.459
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