Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTLFAKLST-GGI-TPTGPAIREATLQFEKIR---------SRRGMLADDERRFDEFGM
4IGI Chain:A ((1024-1143))
-----------------------------------------------------------------------------------------------------------------------------------EKDVVFLIDGSEGVRSGFPLLKDFVQRVVESLDVGPDRVRVALVQYSDRTRPEFYLNSHMDQ-QGVISAIRRLTLLGGPTPNTGAALEFVLRNILTSSTGSRIAEGVPQLLIVLTAEPSGD----
General information:
TITO was launched using:
RESULT:
Template:
4IGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38700 for 800 contacts (-48.4/contact) +
2D Compatibility (PS) -11201 + (NN) 1143 + (LL) 10452
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -43606.0 ( -54.51 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_4IGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IGI-query.scw
PDB file :
Tito_Scwrl_4IGI.pdb
: