Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFL-EGVIVIPQFVLEELQHIAD-SSDVLKRNRGRRGLDILNRIQKELD---IEVEIYEGDFEDIQE------VDSK-LVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
3I8O Chain:A ((3-142)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMG-----REIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVLD--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84547 for 947 contacts (-89.3/contact) +
2D Compatibility (PS) -14183 + (NN) -2389 + (LL) 19840
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -89829.0 ( -94.86 by residue)
QMean score : 0.512
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