Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
1TWF Chain:I ((3-16))
-------------------------------TFRFCRDCNNMLYP----
General information:
TITO was launched using:
RESULT:
Template:
1TWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 52 for 45 contacts (1.2/contact) +
2D Compatibility (PS) -1473 + (NN) -26 + (LL) 2704
1D Compatibility (HY) -800 + (ID) 150
Total energy: 307.0 ( 6.82 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1TWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TWF-query.scw
PDB file :
Tito_Scwrl_1TWF.pdb
: