Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQIDKL
4ZN3 Chain:A ((1-142))
---MIFAVRTMVGQEKNIAGLM---------ASRAEKEQLDV----------YSILASESLKGYVLVEAETKGDVEELIKGMPRVRGIV--------PGTIAIEEIEPLLTPKK-----IIENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEVTLELENAAVPIPITLPVEGVKIV
General information:
TITO was launched using:
RESULT:
Template:
4ZN3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69168 for 934 contacts (-74.1/contact) +
2D Compatibility (PS) -15280 + (NN) -746 + (LL) 1532
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -91562.0 ( -98.03 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_4ZN3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZN3-query.scw
PDB file :
Tito_Scwrl_4ZN3.pdb
: