Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANVEFKVYKNTMTRRAVEQAE-------LNGLNDFLTGPNAIAFSTEDVVAPAKVLNDFAKNHEALEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPVRNLALAAKAVAEQKEEQGA
3JSY Chain:A ((10-112))
----APWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKS-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23959 for 631 contacts (-38.0/contact) +
2D Compatibility (PS) -10446 + (NN) -5585 + (LL) 6520
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -40920.0 ( -64.85 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_3JSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JSY-query.scw
PDB file :
Tito_Scwrl_3JSY.pdb
: