Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
| 4CCY Chain:A ((35-294)) | -----------FYVSTRFGKTHIIASGP-KDAPSLILLHGGLFSSAM-WYP-NIAAWSSQFRTYAVDIIGDKNKSIPSA--AMETRADFAEWMKDVFDSL----GLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYAAELT---GARGAES---Y--------------IKWITGD-SYDL---H-PLL---QRQIVAG-VEWQDEQ-----RSLK--PTENGFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVL-VPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143895 for 2275 contacts (-63.3/contact) +
2D Compatibility (PS) -27252 + (NN) -7830 + (LL) 4320
1D Compatibility (HY) -4400 + (ID) 2100
Total energy: -181157.0 ( -79.63 by residue)
QMean score : 0.382
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