Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
3DL0 Chain:B ((1-216))
MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGLK-
General information:
TITO was launched using:
RESULT:
Template:
3DL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85359 for 1670 contacts (-51.1/contact) +
2D Compatibility (PS) -23656 + (NN) -15588 + (LL) 64
1D Compatibility (HY) -30000 + (ID) 10350
Total energy: -164889.0 ( -98.74 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3DL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL0-query.scw
PDB file :
Tito_Scwrl_3DL0.pdb
: