Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYDLTRGRITYRYK
1NNX Chain:A ((37-87))
---DTWVTLRGNIVERISDDLYVFKDASG-TINVDIDHKRWN-GVTVTPKDTVEIQ----------------
General information:
TITO was launched using:
RESULT:
Template:
1NNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23295 for 253 contacts (-92.1/contact) +
2D Compatibility (PS) -5606 + (NN) -205 + (LL) 1388
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -31868.0 ( -125.96 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1NNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NNX-query.scw
PDB file :
Tito_Scwrl_1NNX.pdb
: